Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar nucleotide epimerase yfch family protein | RT97_03850 | Not Available | Positive | 832871 - 834367 | 54466.8 |
| atp-dependent dna helicase recg | RT97_03855 | Not Available | Positive | 834379 - 836505 | 77144.4 |
| lysine transporter lyse | RT97_03860 | Not Available | Negative | 836521 - 837153 | 22118.7 |
| gntr family transcriptional regulator | RT97_03865 | Not Available | Negative | 837229 - 837933 | 25859.3 |
| membrane protein | RT97_03870 | Not Available | Positive | 838244 - 838987 | 26573.2 |
| permease | RT97_03875 | Not Available | Positive | 838990 - 839946 | 33866.9 |
| pyrrolidone-carboxylate peptidase 2 | RT97_03880 | Not Available | Positive | 839957 - 840643 | 23947.8 |
| hypothetical protein | RT97_03885 | Not Available | Positive | 840696 - 841475 | 27171.5 |
| acetyl-coa carboxylase | RT97_03890 | Not Available | Positive | 841478 - 843079 | 55222.3 |
| acetyl-coa carboxylase | RT97_03895 | Not Available | Positive | 843090 - 844817 | 59963.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
