Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_03800 | Not Available | Positive | 824979 - 825476 | 18353.1 |
| hypothetical protein | RT97_03805 | Not Available | Positive | 825473 - 825979 | 16082.5 |
| membrane protein | RT97_03810 | Not Available | Positive | 825976 - 826761 | 28613.5 |
| serine endopeptidase | RT97_03815 | Not Available | Positive | 826786 - 827850 | 39599.8 |
| 5'-nucleotidase | RT97_03820 | Not Available | Positive | 828032 - 828409 | 12784.4 |
| 3-oxoacyl-acp reductase | RT97_03825 | Not Available | Negative | 828521 - 829321 | 27920.4 |
| hypothetical protein | RT97_03830 | Not Available | Positive | 829459 - 829830 | 13149.3 |
| queuine trna-ribosyltransferase | RT97_03835 | Not Available | Negative | 829851 - 831023 | 43479.4 |
| s-adenosylmethionine trna ribosyltransferase | RT97_03840 | Not Available | Negative | 831032 - 832075 | 38105.6 |
| hypothetical protein | RT97_03845 | Not Available | Positive | 832203 - 832874 | 25306.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
