Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m15 | RT97_03750 | Not Available | Negative | 815144 - 816550 | 50091.0 |
| gdp-mannose pyrophosphatase | RT97_03755 | Not Available | Negative | 816606 - 817193 | 22173.4 |
| deor faimly transcriptional regulator | RT97_03760 | Not Available | Positive | 817274 - 818047 | 26827.7 |
| peptidase m22 | RT97_03765 | Not Available | Positive | 818096 - 818836 | 25099.1 |
| alanine acetyltransferase | RT97_03770 | Not Available | Positive | 818833 - 819375 | 19870.9 |
| uracil-dna glycosylase | RT97_03775 | Not Available | Positive | 819375 - 820172 | 27494.2 |
| orotidine 5'-phosphate decarboxylase | RT97_03780 | Not Available | Positive | 820206 - 821030 | 29133.7 |
| cro/cl family transcriptional regulator | RT97_03785 | Not Available | Negative | 821035 - 821769 | 27936.2 |
| hypothetical protein | RT97_03790 | Not Available | Positive | 821909 - 822766 | 30452.3 |
| glycerol acyltransferase | RT97_03795 | Not Available | Positive | 822906 - 824861 | 70613.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
