Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-1,6-bisphosphate aldolase | RT97_03700 | Not Available | Positive | 804891 - 805955 | 38670.4 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | RT97_03705 | Not Available | Positive | 806162 - 807067 | 33045.7 |
| heat-shock protein | RT97_03710 | Not Available | Negative | 807172 - 807612 | 15024.9 |
| regulator | RT97_03715 | Not Available | Negative | 807675 - 809123 | 51949.0 |
| xre family transcriptional regulator | RT97_03720 | Not Available | Negative | 809165 - 809473 | 10864.2 |
| thioredoxin | RT97_03725 | Not Available | Negative | 809599 - 810519 | 33602.2 |
| n5-carboxyaminoimidazole ribonucleotide mutase | RT97_03730 | Not Available | Positive | 810556 - 811107 | 18429.3 |
| phosphoribosylaminoimidazole carboxylase | RT97_03735 | Not Available | Positive | 811104 - 812297 | 42018.8 |
| translation factor sua5 | RT97_03740 | Not Available | Positive | 812294 - 813295 | 35022.9 |
| hypothetical protein | RT97_03745 | Not Available | Negative | 813396 - 814988 | 54329.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
