Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transporter | RT97_03650 | Not Available | Positive | 794656 - 794991 | 12291.3 |
| fad-binding monooxygenase | RT97_03655 | Not Available | Negative | 794996 - 796636 | 59792.1 |
| hypothetical protein | RT97_03660 | Not Available | Negative | 796644 - 797765 | 40710.5 |
| glyoxalase | RT97_03665 | Not Available | Negative | 797758 - 798306 | 20109.7 |
| lysr family transcriptional regulator | RT97_03670 | Not Available | Positive | 798392 - 799297 | 33249.7 |
| phosphoglycerate kinase | RT97_03675 | Not Available | Positive | 799391 - 800584 | 41020.4 |
| pyruvate kinase | RT97_03680 | Not Available | Positive | 800672 - 802120 | 51881.0 |
| 1-aminocyclopropane-1-carboxylate deaminase | RT97_03685 | Not Available | Negative | 802223 - 803239 | 36735.1 |
| asnc family transcriptional regulator | RT97_03690 | Not Available | Positive | 803376 - 803861 | 17862.9 |
| esterase | RT97_03695 | Not Available | Positive | 803942 - 804826 | 30895.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
