Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endoribonuclease | RT97_03500 | Not Available | Positive | 757752 - 758210 | 16890.4 |
| tetr family transcriptional regulator | RT97_03505 | Not Available | Negative | 758348 - 758998 | 24264.1 |
| ferredoxin | RT97_03510 | Not Available | Negative | 758995 - 759960 | 34347.1 |
| nad(p)h dehydrogenase | RT97_03515 | Not Available | Negative | 759981 - 760571 | 22789.8 |
| nitrate abc transporter substrate-binding protein | RT97_03520 | Not Available | Negative | 760725 - 761753 | 37286.0 |
| fad-binding protein | RT97_03525 | Not Available | Negative | 761819 - 763183 | 50178.0 |
| abc transporter atp-binding protein | RT97_03530 | Not Available | Negative | 763188 - 764000 | 29783.5 |
| nitrate abc transporter atpase | RT97_03535 | Not Available | Negative | 764047 - 764856 | 29889.1 |
| creatininase | RT97_03540 | Not Available | Negative | 765016 - 765837 | 30151.1 |
| hypothetical protein | RT97_03545 | Not Available | Negative | 765982 - 768597 | 88593.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
