Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | RT97_03450 | Not Available | Negative | 746138 - 746614 | 17529.5 |
| pyruvate dehydrogenase | RT97_03455 | Not Available | Positive | 746720 - 749371 | 96333.4 |
| gntr family transcriptional regulator | RT97_03460 | Not Available | Positive | 749408 - 750184 | 28252.6 |
| mfs transporter | RT97_03465 | Not Available | Positive | 750351 - 751682 | 48394.9 |
| 3-hydroxyisobutyrate dehydrogenase | RT97_03470 | Not Available | Positive | 751836 - 752756 | 31291.8 |
| nad-dependent epimerase | RT97_03475 | Not Available | Positive | 752775 - 753794 | 35491.4 |
| membrane protein | RT97_03480 | Not Available | Positive | 753798 - 755069 | 43382.5 |
| aldolase | RT97_03485 | Not Available | Positive | 755066 - 755731 | 23893.7 |
| hydroxypyruvate isomerase | RT97_03490 | Not Available | Positive | 755744 - 756562 | 30297.1 |
| amidohydrolase | RT97_03495 | Not Available | Positive | 756559 - 757755 | 42969.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
