Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_03400 | Not Available | Negative | 729224 - 730282 | 36552.3 |
| glutamate-ammonia-ligase adenylyltransferase | RT97_03405 | Not Available | Negative | 730275 - 733079 | 104930.0 |
| hypothetical protein | RT97_03410 | Not Available | Positive | 733105 - 737295 | 148747.0 |
| acyltransferase | RT97_03415 | Not Available | Positive | 737292 - 738107 | 29582.3 |
| histidine kinase | RT97_03420 | Not Available | Positive | 738110 - 740161 | 75312.9 |
| histidine kinase | RT97_03425 | Not Available | Positive | 740292 - 740918 | 23194.1 |
| flagellar motor protein motb | RT97_03430 | Not Available | Negative | 740923 - 741489 | 19346.8 |
| membrane protein | RT97_03435 | Not Available | Negative | 741571 - 742230 | 22425.3 |
| transglycosylase | RT97_03440 | Not Available | Positive | 742588 - 743736 | 41917.9 |
| phosphatase | RT97_03445 | Not Available | Positive | 743857 - 746100 | 78369.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
