Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | RT97_03350 | Not Available | Positive | 719615 - 720226 | 22665.3 |
| short-chain dehydrogenase | RT97_03355 | Not Available | Negative | 720344 - 721138 | 28086.2 |
| mfs transporter | RT97_03360 | Not Available | Negative | 721135 - 722430 | 44915.4 |
| cyclopropane-fatty-acyl-phospholipid synthase | RT97_03365 | Not Available | Negative | 722437 - 723663 | 45725.3 |
| hypothetical protein | RT97_03370 | Not Available | Negative | 723660 - 724463 | 30166.0 |
| nadh-ubiquinone oxidoreductase subunit 6 | RT97_03375 | Not Available | Negative | 724460 - 725803 | 48948.4 |
| glutathione peroxidase | RT97_03380 | Not Available | Negative | 726097 - 726711 | 22056.4 |
| ferritin | RT97_03385 | Not Available | Positive | 726842 - 727699 | 33591.1 |
| rna polymerase subunit sigma-24 | RT97_03390 | Not Available | Positive | 727783 - 728664 | 33182.6 |
| alkylhydroperoxidase | RT97_03395 | Not Available | Positive | 728752 - 729213 | 17439.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
