Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m48 | RT97_03300 | Not Available | Positive | 709237 - 710805 | 56483.9 |
| membrane protein | RT97_03305 | Not Available | Negative | 710825 - 711178 | 12278.9 |
| hypothetical protein | RT97_03310 | Not Available | Negative | 711264 - 711728 | 16995.5 |
| membrane protein | RT97_03315 | Not Available | Negative | 711823 - 712569 | 26202.2 |
| fe-s oxidoreductase | RT97_03320 | Not Available | Positive | 713064 - 713528 | 17468.3 |
| hypothetical protein | RT97_03325 | Not Available | Positive | 713539 - 713844 | 11513.8 |
| hypothetical protein | RT97_03330 | Not Available | Negative | 713966 - 714526 | 20732.8 |
| amino acid abc transporter substrate-binding protein | RT97_03335 | Not Available | Negative | 714572 - 716737 | 78405.8 |
| membrane protein | RT97_03340 | Not Available | Negative | 716818 - 717957 | 40926.1 |
| adenylosuccinate lyase | RT97_03345 | Not Available | Negative | 718098 - 719477 | 50332.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
