Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RT97_03150 | Not Available | Negative | 676022 - 677005 | 34101.1 |
| dna topoisomerase iii | RT97_03155 | Not Available | Negative | 677012 - 679978 | 108726.0 |
| lysine methyltransferase | RT97_03160 | Not Available | Positive | 680160 - 680789 | 23987.3 |
| biotin--acetyl-coa-carboxylase ligase | RT97_03165 | Not Available | Positive | 680792 - 681604 | 28805.5 |
| sporulation protein | RT97_03170 | Not Available | Positive | 681614 - 681811 | 7157.92 |
| histidine kinase | RT97_03175 | Not Available | Negative | 681830 - 683272 | 52290.1 |
| hypothetical protein | RT97_03180 | Not Available | Positive | 683623 - 684366 | 25539.9 |
| transcriptional regulator | RT97_03185 | Not Available | Negative | 684390 - 685064 | 24575.0 |
| marr family transcriptional regulator | RT97_03190 | Not Available | Negative | 685129 - 685614 | 17687.1 |
| recombinase a | RT97_03195 | Not Available | Positive | 685762 - 686871 | 39255.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
