Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | RT97_31820 | Not Available | Negative | 6873925 - 6875055 | 40035.7 |
| carboxypeptidase | RT97_31825 | Not Available | Negative | 6875174 - 6876424 | 44032.7 |
| acetyl-coa acetyltransferase | RT97_31830 | Not Available | Negative | 6876518 - 6877702 | 40860.5 |
| isocitrate dehydrogenase | RT97_31835 | Not Available | Negative | 6877776 - 6879596 | 70612.3 |
| carbonate dehydratase | RT97_31840 | Not Available | Negative | 6879610 - 6880341 | 26849.9 |
| merr family transcriptional regulator | RT97_31845 | Not Available | Negative | 6880373 - 6880780 | 15093.3 |
| zn-dependent hydrolase | RT97_31850 | Not Available | Positive | 6880910 - 6881980 | 39662.7 |
| protein kinase | RT97_31855 | Not Available | Positive | 6881998 - 6883305 | 46704.9 |
| pseudouridine synthase | RT97_31860 | Not Available | Positive | 6883302 - 6884219 | 35084.2 |
| 3-oxoacyl-acp reductase | RT97_31865 | Not Available | Positive | 6884289 - 6885059 | 26915.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
