Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-1-semialdehyde 2,1-aminomutase | RT97_31770 | Not Available | Negative | 6860110 - 6861414 | 46589.8 |
| tetr family transcriptional regulator | RT97_31775 | Not Available | Positive | 6861522 - 6862277 | 27155.8 |
| guanylate cyclase | RT97_31780 | Not Available | Negative | 6862274 - 6863784 | 55399.1 |
| thiamine biosynthesis protein thic | RT97_31785 | Not Available | Negative | 6864189 - 6866075 | 69649.8 |
| hypothetical protein | RT97_31790 | Not Available | Negative | 6866434 - 6866853 | 15852.5 |
| hypothetical protein | RT97_31795 | Not Available | Negative | 6866909 - 6868696 | 64712.7 |
| luxr family transcriptional regulator | RT97_31800 | Not Available | Positive | 6868861 - 6869595 | 27895.3 |
| indole acetimide hydrolase | RT97_31805 | Not Available | Negative | 6869762 - 6871183 | 48279.3 |
| metallophosphoesterase | RT97_31810 | Not Available | Negative | 6871356 - 6872189 | 29859.0 |
| trehalase | RT97_31815 | Not Available | Negative | 6872186 - 6873844 | 60858.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
