Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyketide cyclase | RT97_31720 | Not Available | Positive | 6850718 - 6851245 | 19297.4 |
| 3-demethylubiquinone-9 3-methyltransferase | RT97_31725 | Not Available | Positive | 6851299 - 6851718 | 15121.3 |
| dsba oxidoreductase | RT97_31730 | Not Available | Positive | 6851762 - 6852792 | 36252.7 |
| nitrite reductase | RT97_31735 | Not Available | Positive | 6853475 - 6855253 | 66046.0 |
| hypothetical protein | RT97_31740 | Not Available | Positive | 6855250 - 6855645 | 14451.0 |
| phosphoadenylylsulfate reductase | RT97_31745 | Not Available | Positive | 6855665 - 6856285 | 23230.5 |
| sulfate adenylyltransferase subunit 2 | RT97_31750 | Not Available | Positive | 6856328 - 6857269 | 35554.2 |
| sulfate adenylyltransferase | RT97_31755 | Not Available | Positive | 6857269 - 6858609 | 47662.7 |
| ferredoxin | RT97_31760 | Not Available | Positive | 6858652 - 6858981 | 12060.4 |
| ferredoxin-nadp reductase | RT97_31765 | Not Available | Positive | 6859098 - 6860123 | 36033.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
