Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_31670 | Not Available | Positive | 6839276 - 6841516 | 77329.1 |
| amidohydrolase | RT97_31675 | Not Available | Negative | 6841533 - 6842402 | 32589.0 |
| enoyl-coa hydratase | RT97_31680 | Not Available | Positive | 6842506 - 6843279 | 27529.1 |
| feruloyl-coa synthase | RT97_31685 | Not Available | Positive | 6843371 - 6845224 | 66762.9 |
| 3-hydroxy-2-methylbutyryl-coa dehydrogenase | RT97_31690 | Not Available | Positive | 6845247 - 6846011 | 26091.8 |
| twin-arginine translocation pathway signal protein | RT97_31695 | Not Available | Positive | 6846149 - 6847141 | 34128.1 |
| acyl-coa dehydrogenase | RT97_31700 | Not Available | Positive | 6847150 - 6848895 | 62861.5 |
| marr family transcriptional regulator | RT97_31705 | Not Available | Positive | 6848933 - 6849424 | 17629.4 |
| tetr family transcriptional regulator | RT97_31710 | Not Available | Negative | 6849447 - 6850106 | 23289.0 |
| 3-demethylubiquinone-9 3-methyltransferase | RT97_31715 | Not Available | Positive | 6850239 - 6850673 | 15621.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
