Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit ii | RT97_31620 | Not Available | Negative | 6830783 - 6831961 | 42735.8 |
| membrane protein | RT97_31625 | Not Available | Negative | 6832023 - 6832499 | 17601.4 |
| biotin synthase | RT97_31630 | Not Available | Negative | 6832688 - 6833602 | 33819.4 |
| phosphoribosyltransferase | RT97_31635 | Not Available | Positive | 6833626 - 6834351 | 25972.6 |
| rrna methylase | RT97_31640 | Not Available | Positive | 6834385 - 6834846 | 17149.4 |
| hypothetical protein | RT97_31645 | Not Available | Positive | 6834977 - 6835270 | 10046.8 |
| dehydratase | RT97_31650 | Not Available | Negative | 6835286 - 6835756 | 17355.1 |
| cobyrinic acid a,c-diamide synthase | RT97_31655 | Not Available | Negative | 6835832 - 6836452 | 22620.5 |
| nad(p)h dehydrogenase | RT97_31660 | Not Available | Positive | 6836546 - 6837295 | 27234.8 |
| potassium transporter | RT97_31665 | Not Available | Positive | 6837298 - 6839148 | 67142.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
