Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| photosynthetic protein synthase i | RT97_31570 | Not Available | Negative | 6822552 - 6823157 | 21699.2 |
| protoheme ix farnesyltransferase | RT97_31575 | Not Available | Negative | 6823177 - 6824082 | 33179.5 |
| cytochrome c oxidase subunit i | RT97_31580 | Not Available | Negative | 6824079 - 6825320 | 44166.1 |
| transmembrane protein | RT97_31585 | Not Available | Negative | 6825328 - 6826011 | 25082.2 |
| transmembrane cytochrome oxidase | RT97_31590 | Not Available | Negative | 6825995 - 6826825 | 30483.6 |
| membrane protein | RT97_31595 | Not Available | Positive | 6826868 - 6827098 | 8455.93 |
| mfs transporter | RT97_31600 | Not Available | Negative | 6827176 - 6828057 | 32952.0 |
| membrane protein | RT97_31605 | Not Available | Negative | 6828117 - 6828323 | 7327.11 |
| cytochrome c oxidase assembly protein | RT97_31610 | Not Available | Negative | 6828320 - 6828946 | 22936.7 |
| cytochrome oxidase subunit i | RT97_31615 | Not Available | Negative | 6829102 - 6830739 | 60889.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
