Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | RT97_31520 | Not Available | Positive | 6811016 - 6811924 | 32127.7 |
| zinc protease | RT97_31525 | Not Available | Negative | 6811928 - 6813268 | 47623.9 |
| peptidase m16 | RT97_31530 | Not Available | Negative | 6813286 - 6814689 | 50540.1 |
| cell division protein ftsy | RT97_31535 | Not Available | Positive | 6814767 - 6816044 | 43960.2 |
| hypothetical protein | RT97_31540 | Not Available | Negative | 6816206 - 6817225 | 34804.7 |
| histidine kinase | RT97_31545 | Not Available | Negative | 6817412 - 6819238 | 66050.2 |
| luxr family transcriptional regulator | RT97_31550 | Not Available | Negative | 6819255 - 6819965 | 24701.7 |
| membrane protein | RT97_31555 | Not Available | Positive | 6820141 - 6820605 | 17299.8 |
| rna polymerase factor sigma-32 | RT97_31560 | Not Available | Positive | 6820704 - 6821645 | 34507.2 |
| dna alkylation repair protein | RT97_31565 | Not Available | Negative | 6821690 - 6822517 | 30416.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
