Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter | RT97_03100 | Not Available | Positive | 665724 - 667208 | 49996.5 |
| dead/deah box helicase | RT97_03105 | Not Available | Negative | 667174 - 668613 | 51885.6 |
| translation initiation factor if-1 | RT97_03110 | Not Available | Negative | 668698 - 668967 | 10035.1 |
| hypothetical protein | RT97_03115 | Not Available | Negative | 669028 - 669288 | 9313.16 |
| mfs transporter | RT97_03120 | Not Available | Negative | 669678 - 670877 | 39743.4 |
| gntr family transcriptional regulator | RT97_03125 | Not Available | Positive | 671008 - 672465 | 52378.3 |
| catalase | RT97_03130 | Not Available | Positive | 672567 - 673649 | 38766.4 |
| ap endonuclease | RT97_03135 | Not Available | Negative | 673656 - 674711 | 38949.0 |
| peptidase c26 | RT97_03140 | Not Available | Positive | 674849 - 675730 | 32706.0 |
| hypothetical protein | RT97_03145 | Not Available | Negative | 675743 - 675928 | 5628.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
