Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_00245 | Not Available | Positive | 49759 - 49959 | 7712.7 |
| hypothetical protein | RT97_00255 | Not Available | Negative | 50930 - 51745 | 30968.7 |
| hypothetical protein | RT97_00260 | Not Available | Negative | 51742 - 52017 | 10279.3 |
| hypothetical protein | RT97_00265 | Not Available | Negative | 52123 - 54549 | 87453.5 |
| hypothetical protein | RT97_00270 | Not Available | Negative | 54546 - 54842 | 10579.6 |
| hypothetical protein | RT97_00275 | Not Available | Negative | 56178 - 56762 | 21461.6 |
| hypothetical protein | RT97_00280 | Not Available | Positive | 58421 - 58990 | 22086.3 |
| hypothetical protein | RT97_00285 | Not Available | Positive | 60297 - 60752 | 16914.8 |
| phosphoserine phosphatase | RT97_00290 | Not Available | Positive | 60749 - 61459 | 25411.9 |
| lactate dehydrogenase | RT97_00295 | Not Available | Positive | 61456 - 62529 | 37873.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
