Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | RT97_31470 | Not Available | Negative | 6803616 - 6804311 | 25689.4 |
| hypothetical protein | RT97_31475 | Not Available | Negative | 6804343 - 6804996 | 22313.2 |
| alpha/beta hydrolase | RT97_31480 | Not Available | Positive | 6805125 - 6805853 | 26404.0 |
| pyrrolidone-carboxylate peptidase | RT97_31485 | Not Available | Negative | 6805860 - 6806537 | 23710.6 |
| hypothetical protein | RT97_31490 | Not Available | Negative | 6806555 - 6807295 | 26168.1 |
| allophanate hydrolase | RT97_31495 | Not Available | Negative | 6807377 - 6808381 | 34880.4 |
| allophanate hydrolase | RT97_31500 | Not Available | Negative | 6808378 - 6809040 | 23239.1 |
| phosphopantetheine adenylyltransferase | RT97_31505 | Not Available | Negative | 6809047 - 6809550 | 18546.5 |
| methyltransferase | RT97_31510 | Not Available | Negative | 6809594 - 6810250 | 22985.5 |
| amino acid transporter | RT97_31515 | Not Available | Negative | 6810305 - 6810940 | 21703.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
