Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | RT97_31370 | Not Available | Positive | 6785568 - 6786458 | 31967.3 |
| Trna-gln | Not Available | Not Available | Positive | 6786528 - 6786604 | Not Available |
| ribose-phosphate pyrophosphokinase | RT97_31380 | Not Available | Positive | 6786782 - 6787756 | 35079.4 |
| 50s ribosomal protein l25 | RT97_31385 | Not Available | Positive | 6787846 - 6788514 | 23916.9 |
| hypothetical protein | RT97_31390 | Not Available | Negative | 6788596 - 6789153 | 19342.1 |
| hypothetical protein | RT97_31395 | Not Available | Negative | 6789200 - 6789763 | 19428.3 |
| peptidyl-trna hydrolase | RT97_31400 | Not Available | Positive | 6789975 - 6790607 | 23003.8 |
| hypothetical protein | RT97_31405 | Not Available | Positive | 6790644 - 6791147 | 18255.2 |
| ferredoxin | RT97_31410 | Not Available | Negative | 6791133 - 6791420 | 10509.6 |
| abc transporter permease | RT97_31415 | Not Available | Positive | 6791524 - 6792474 | 34121.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
