Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 6774482 - 6774558 | Not Available |
| hrca family transcriptional regulator | RT97_31325 | Not Available | Negative | 6774590 - 6775597 | 36918.4 |
| inorganic polyphosphate kinase | RT97_31330 | Not Available | Positive | 6775629 - 6776540 | 32725.2 |
| dna repair protein | RT97_31335 | Not Available | Positive | 6776542 - 6778224 | 59734.4 |
| nucleotide-binding protein | RT97_31340 | Not Available | Positive | 6778307 - 6779182 | 32784.2 |
| adenine glycosylase | RT97_31345 | Not Available | Negative | 6779186 - 6780223 | 38284.1 |
| dynamin family protein | RT97_31350 | Not Available | Negative | 6780258 - 6782225 | 73552.5 |
| formamidopyrimidine-dna glycosylase | RT97_31355 | Not Available | Negative | 6782314 - 6783126 | 29657.1 |
| hypothetical protein | RT97_31360 | Not Available | Positive | 6783197 - 6785053 | 67880.1 |
| membrane protein | RT97_31365 | Not Available | Positive | 6785050 - 6785571 | 18054.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
