Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | RT97_31270 | Not Available | Positive | 6761106 - 6761309 | 6946.23 |
| multidrug mfs transporter | RT97_31275 | Not Available | Positive | 6761648 - 6762949 | 47366.1 |
| amidase | RT97_31280 | Not Available | Negative | 6763188 - 6764609 | 50508.5 |
| pyruvate dehydrogenase | RT97_31285 | Not Available | Negative | 6764688 - 6766424 | 61866.8 |
| endoribonuclease | RT97_31290 | Not Available | Negative | 6766529 - 6766912 | 13689.5 |
| alcohol dehydrogenase | RT97_31295 | Not Available | Positive | 6767756 - 6768724 | 33566.9 |
| chloroperoxidase | RT97_31300 | Not Available | Positive | 6768779 - 6769600 | 29691.3 |
| phospholipase | RT97_31305 | Not Available | Positive | 6769821 - 6771392 | 58281.6 |
| hypothetical protein | RT97_31310 | Not Available | Positive | 6771522 - 6772298 | 28684.0 |
| hypothetical protein | RT97_31315 | Not Available | Positive | 6773246 - 6774004 | 26804.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
