Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_31200 | Not Available | Positive | 6743866 - 6744852 | 36869.7 |
| polysaccharide pyruvyl transferase | RT97_31205 | Not Available | Positive | 6744849 - 6745997 | 41872.5 |
| glycosyl transferase family 1 | RT97_31210 | Not Available | Positive | 6746014 - 6747084 | 39376.8 |
| hypothetical protein | RT97_31215 | Not Available | Positive | 6747081 - 6748352 | 46359.4 |
| hypothetical protein | RT97_31220 | Not Available | Positive | 6748358 - 6749602 | 45106.6 |
| phytanoyl-coa dioxygenase | RT97_31225 | Not Available | Positive | 6749617 - 6750240 | 23711.0 |
| alkylhydroperoxidase | RT97_31240 | Not Available | Positive | 6752282 - 6752674 | 14196.1 |
| transcriptional regulator | RT97_31245 | Not Available | Negative | 6752955 - 6756716 | 134124.0 |
| dna-binding protein | RT97_31250 | Not Available | Positive | 6756847 - 6757446 | 21563.7 |
| acetyltransferase | RT97_31255 | Not Available | Positive | 6757443 - 6757991 | 19953.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
