Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | RT97_31145 | Not Available | Negative | 6728078 - 6728596 | 18876.8 |
| pyruvate ferredoxin oxidoreductase | RT97_31150 | Not Available | Positive | 6728689 - 6732291 | 130613.0 |
| laci family transcriptional regulator | RT97_31155 | Not Available | Negative | 6732304 - 6733335 | 36885.4 |
| permease dsdx | RT97_31160 | Not Available | Positive | 6733545 - 6734897 | 47528.3 |
| gluconokinase | RT97_31165 | Not Available | Positive | 6734928 - 6736487 | 56028.2 |
| hypothetical protein | RT97_31175 | Not Available | Positive | 6737571 - 6737774 | 7476.45 |
| sugar transporter | RT97_31180 | Not Available | Positive | 6738682 - 6739836 | 40790.1 |
| protein tyrosine phosphatase | RT97_31185 | Not Available | Positive | 6739847 - 6740302 | 16333.0 |
| tyrosine protein kinase | RT97_31190 | Not Available | Positive | 6740299 - 6742560 | 81474.8 |
| udp-phosphate galactose phosphotransferase | RT97_31195 | Not Available | Positive | 6742893 - 6743618 | 27830.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
