Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | RT97_31080 | Not Available | Positive | 6719257 - 6719931 | 24782.4 |
| crp/fnr family transcriptional regulator | RT97_31085 | Not Available | Positive | 6720050 - 6720757 | 26199.7 |
| hypothetical protein | RT97_31090 | Not Available | Negative | 6720808 - 6721164 | 12550.1 |
| hypothetical protein | RT97_31095 | Not Available | Negative | 6721161 - 6722270 | 39095.8 |
| copg family transcriptional regulator | RT97_31100 | Not Available | Negative | 6722300 - 6722728 | 14908.3 |
| hypothetical protein | RT97_31105 | Not Available | Negative | 6722845 - 6723690 | 30962.1 |
| dna-binding protein | RT97_31110 | Not Available | Negative | 6723760 - 6724680 | 33378.4 |
| hypothetical protein | RT97_31120 | Not Available | Negative | 6725136 - 6725399 | 8914.41 |
| hypothetical protein | RT97_31125 | Not Available | Negative | 6725396 - 6725620 | 8130.8 |
| membrane protein | RT97_31135 | Not Available | Negative | 6726320 - 6727321 | 32844.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
