Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine--fructose-6-phosphate aminotransferase | RT97_30960 | Not Available | Positive | 6685491 - 6687371 | 67483.1 |
| nadph:quinone oxidoreductase | RT97_30970 | Not Available | Negative | 6687956 - 6688927 | 34350.3 |
| arsr family transcriptional regulator | RT97_30975 | Not Available | Positive | 6689465 - 6689782 | 11606.1 |
| hypothetical protein | RT97_30985 | Not Available | Positive | 6692827 - 6693321 | 16863.4 |
| hypothetical protein | RT97_30990 | Not Available | Positive | 6693547 - 6693933 | 13316.7 |
| hypothetical protein | RT97_30995 | Not Available | Negative | 6694580 - 6695710 | 41464.6 |
| hypothetical protein | RT97_31000 | Not Available | Negative | 6695932 - 6696894 | 36000.7 |
| luxr family transcriptional regulator | RT97_31005 | Not Available | Positive | 6697095 - 6698141 | 38351.5 |
| hypothetical protein | RT97_31010 | Not Available | Positive | 6698351 - 6698605 | 9208.07 |
| arac family transcriptional regulator | RT97_31015 | Not Available | Negative | 6698644 - 6699657 | 36767.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
