Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | RT97_30910 | Not Available | Negative | 6676162 - 6676728 | 19787.3 |
| lytic transglycosylase | RT97_30915 | Not Available | Negative | 6676820 - 6678832 | 73781.4 |
| 5-formyltetrahydrofolate cyclo-ligase | RT97_30920 | Not Available | Positive | 6678860 - 6679477 | 23086.8 |
| lysr family transcriptional regulator | RT97_30925 | Not Available | Negative | 6679567 - 6680550 | 36750.1 |
| hypothetical protein | RT97_30930 | Not Available | Positive | 6680840 - 6681160 | 11150.4 |
| blue light sensor protein | RT97_30935 | Not Available | Negative | 6681246 - 6681650 | 14816.8 |
| crp/fnr family transcriptional regulator | RT97_30940 | Not Available | Positive | 6681762 - 6682511 | 28335.1 |
| hypothetical protein | RT97_30945 | Not Available | Negative | 6682537 - 6683406 | 32799.0 |
| glucosamine-1-phosphate n-acetyltransferase | RT97_30950 | Not Available | Positive | 6683423 - 6684853 | 49476.4 |
| asnc family transcriptional regulator | RT97_30955 | Not Available | Negative | 6684869 - 6685351 | 17549.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
