Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | RT97_30855 | Not Available | Positive | 6663407 - 6664333 | 32271.8 |
| hypothetical protein | RT97_30860 | Not Available | Positive | 6664364 - 6665908 | 56352.6 |
| hypothetical protein | RT97_30865 | Not Available | Positive | 6665905 - 6666354 | 16600.6 |
| 2-aminoadipate aminotransferase | RT97_30870 | Not Available | Negative | 6666351 - 6667811 | 53797.8 |
| hypothetical protein | RT97_30875 | Not Available | Positive | 6668001 - 6668339 | 12098.5 |
| trehalose-6-phosphate synthase | RT97_30880 | Not Available | Negative | 6668514 - 6669899 | 52518.9 |
| glucoamylase | RT97_30885 | Not Available | Negative | 6670009 - 6671931 | 71334.8 |
| phosphatase | RT97_30895 | Not Available | Negative | 6673142 - 6674401 | 46479.1 |
| membrane protein | RT97_30900 | Not Available | Positive | 6674621 - 6675346 | 25703.7 |
| glutathione s-transferase | RT97_30905 | Not Available | Negative | 6675371 - 6676054 | 25362.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
