Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dialkylrecorsinol condensing enzyme | RT97_30805 | Not Available | Negative | 6653731 - 6654663 | 33959.8 |
| abc transporter substrate-binding protein | RT97_30810 | Not Available | Negative | 6654904 - 6656436 | 56758.4 |
| hypothetical protein | RT97_30815 | Not Available | Positive | 6656437 - 6657191 | 27613.1 |
| taurine dioxygenase | RT97_30820 | Not Available | Positive | 6658009 - 6658902 | 33571.9 |
| nitrate abc transporter substrate-binding protein | RT97_30825 | Not Available | Positive | 6658928 - 6659938 | 36174.3 |
| sulfonate abc transporter atp-binding protein | RT97_30830 | Not Available | Positive | 6659998 - 6660870 | 31886.5 |
| abc transporter permease | RT97_30835 | Not Available | Positive | 6661005 - 6661874 | 31724.5 |
| hypothetical protein | RT97_30840 | Not Available | Negative | 6661897 - 6662289 | 14460.4 |
| histidinol phosphate phosphatase | RT97_30845 | Not Available | Positive | 6662402 - 6663178 | 27640.1 |
| hypothetical protein | RT97_30850 | Not Available | Positive | 6663188 - 6663382 | 7280.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
