Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | RT97_30705 | Not Available | Negative | 6633159 - 6634268 | 39528.3 |
| 2-nitropropane dioxygenase | RT97_30710 | Not Available | Negative | 6634330 - 6635292 | 33753.5 |
| acyl-coa dehydrogenase | RT97_30715 | Not Available | Negative | 6635386 - 6637176 | 63693.1 |
| electron transfer flavoprotein subunit beta | RT97_30720 | Not Available | Negative | 6637253 - 6638185 | 31253.1 |
| electron transporter rnfb | RT97_30725 | Not Available | Negative | 6638188 - 6638937 | 26875.0 |
| mechanosensitive ion channel protein | RT97_30730 | Not Available | Negative | 6639071 - 6640351 | 46507.4 |
| deacetylase | RT97_30735 | Not Available | Negative | 6640388 - 6641341 | 35316.9 |
| atpase aaa | RT97_30740 | Not Available | Positive | 6641418 - 6642338 | 32926.0 |
| hypothetical protein | RT97_30745 | Not Available | Positive | 6642335 - 6643312 | 35513.2 |
| transglutaminase | RT97_30750 | Not Available | Positive | 6643323 - 6645344 | 74197.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
