Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl dehydratase | RT97_30655 | Not Available | Negative | 6621347 - 6621787 | 16056.1 |
| lipid-transfer protein | RT97_30660 | Not Available | Negative | 6621802 - 6622986 | 41714.9 |
| fatty-acid--coa ligase | RT97_30665 | Not Available | Negative | 6623039 - 6624598 | 56091.6 |
| arac family transcriptional regulator | RT97_30670 | Not Available | Positive | 6624709 - 6625734 | 37357.3 |
| arsr family transcriptional regulator | RT97_30675 | Not Available | Positive | 6625793 - 6626377 | 22322.0 |
| cytochrome bd biosynthesis protein | RT97_30680 | Not Available | Negative | 6626621 - 6626770 | 5769.99 |
| cytochrome d ubiquinol oxidase subunit 2 | RT97_30685 | Not Available | Negative | 6626789 - 6627943 | 41575.5 |
| cytochrome d terminal oxidase subunit 1 | RT97_30690 | Not Available | Negative | 6627940 - 6629556 | 58743.3 |
| abc transporter atp-binding protein | RT97_30695 | Not Available | Negative | 6629598 - 6631298 | 59795.4 |
| abc transporter atp-binding protein | RT97_30700 | Not Available | Negative | 6631295 - 6632980 | 58202.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
