Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | RT97_30605 | Not Available | Negative | 6614356 - 6614718 | 13262.9 |
| rna polymerase subunit sigma-24 | RT97_30610 | Not Available | Negative | 6614813 - 6616060 | 45682.7 |
| hypothetical protein | RT97_30615 | Not Available | Negative | 6616057 - 6616362 | 11312.2 |
| arsr family transcriptional regulator | RT97_30620 | Not Available | Negative | 6616410 - 6616838 | 15950.1 |
| cupin | RT97_30625 | Not Available | Positive | 6617046 - 6617468 | 15924.0 |
| membrane protein | RT97_30630 | Not Available | Positive | 6617551 - 6618498 | 33428.7 |
| peptidase m50 | RT97_30635 | Not Available | Positive | 6618509 - 6619240 | 26506.9 |
| enoyl-coa hydratase | RT97_30640 | Not Available | Negative | 6619255 - 6620043 | 26923.4 |
| 3-oxoacyl-acp reductase | RT97_30645 | Not Available | Negative | 6620045 - 6620875 | 28782.7 |
| dehydratase | RT97_30650 | Not Available | Negative | 6620910 - 6621332 | 15425.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
