Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_30545 | Not Available | Positive | 6604598 - 6605053 | 15693.8 |
| serine/threonine protein kinase | RT97_30555 | Not Available | Negative | 6605537 - 6606763 | 43293.2 |
| sugar abc transporter atp-binding protein | RT97_30560 | Not Available | Negative | 6606756 - 6607553 | 28550.2 |
| abc transporter permease | RT97_30565 | Not Available | Negative | 6607553 - 6608512 | 32833.2 |
| sugar abc transporter | RT97_30570 | Not Available | Negative | 6608540 - 6609562 | 34837.1 |
| hypothetical protein | RT97_30575 | Not Available | Positive | 6609873 - 6610103 | 8239.94 |
| mfs transporter | RT97_30580 | Not Available | Negative | 6610117 - 6611289 | 42383.6 |
| chorismate synthase | RT97_30585 | Not Available | Negative | 6611307 - 6612419 | 39447.9 |
| hypothetical protein | RT97_30590 | Not Available | Negative | 6612452 - 6612649 | 7301.83 |
| hypothetical protein | RT97_30600 | Not Available | Negative | 6613997 - 6614359 | 13114.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
