Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extradiol dioxygenase | RT97_02995 | Not Available | Negative | 645990 - 646412 | 15540.5 |
| metal-chelation protein chad | RT97_03000 | Not Available | Positive | 646586 - 648187 | 57977.0 |
| peptidylprolyl isomerase | RT97_03005 | Not Available | Negative | 648197 - 648673 | 17335.8 |
| fmn reductase | RT97_03015 | Not Available | Positive | 649770 - 650357 | 21647.1 |
| pirin | RT97_03020 | Not Available | Positive | 650354 - 651214 | 30376.9 |
| amidohydrolase | RT97_03025 | Not Available | Positive | 651309 - 652514 | 43057.1 |
| receptor | RT97_03030 | Not Available | Positive | 652531 - 653523 | 33897.6 |
| surface antigen family protein | RT97_03035 | Not Available | Positive | 653645 - 654349 | 22787.5 |
| dihydrodipicolinate synthase | RT97_03040 | Not Available | Positive | 654501 - 655415 | 33553.9 |
| abc transporter substrate-binding protein | RT97_03045 | Not Available | Positive | 655470 - 656594 | 39485.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
