Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_30390 | Not Available | Negative | 6569311 - 6569558 | 9004.05 |
| fad-binding protein | RT97_30395 | Not Available | Negative | 6569653 - 6570270 | 21959.7 |
| peptide abc transporter atp-binding protein | RT97_30400 | Not Available | Positive | 6570271 - 6570495 | 8519.03 |
| catalase | RT97_30405 | Not Available | Positive | 6570496 - 6571403 | 34223.6 |
| alpha/beta hydrolase | RT97_30410 | Not Available | Positive | 6571404 - 6571607 | 6932.21 |
| transcriptional regulator | RT97_30415 | Not Available | Negative | 6571732 - 6574605 | 103278.0 |
| histidine kinase | RT97_30420 | Not Available | Negative | 6575268 - 6576236 | 34555.4 |
| response regulator receiver protein | RT97_30425 | Not Available | Negative | 6576499 - 6576876 | 13653.5 |
| luxr family transcriptional regulator | RT97_30430 | Not Available | Negative | 6577011 - 6577670 | 23847.2 |
| alpha/beta hydrolase | RT97_30440 | Not Available | Positive | 6583348 - 6584172 | 27983.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
