Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | RT97_30290 | Not Available | Negative | 6550004 - 6551188 | 41569.5 |
| hypothetical protein | RT97_30295 | Not Available | Negative | 6551193 - 6551474 | 9756.64 |
| iron transporter feob | RT97_30300 | Not Available | Negative | 6551509 - 6553404 | 67275.5 |
| iron transporter feoa | RT97_30305 | Not Available | Negative | 6553397 - 6553702 | 10796.9 |
| phosphodiesterase | RT97_30310 | Not Available | Negative | 6553826 - 6554290 | 16126.6 |
| aconitate hydratase | RT97_30315 | Not Available | Negative | 6554295 - 6557162 | 103656.0 |
| membrane protein | RT97_30320 | Not Available | Negative | 6557332 - 6557745 | 14014.6 |
| xre family transcriptional regulator | RT97_30325 | Not Available | Positive | 6557879 - 6558727 | 30558.6 |
| acyl-coa dehydrogenase | RT97_30330 | Not Available | Negative | 6558633 - 6560891 | 81244.8 |
| hypothetical protein | RT97_30335 | Not Available | Negative | 6561033 - 6561662 | 21968.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
