Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_30240 | Not Available | Negative | 6540624 - 6541028 | 14444.2 |
| acetylornithine aminotransferase | RT97_30245 | Not Available | Positive | 6541188 - 6542396 | 42852.2 |
| ornithine carbamoyltransferase | RT97_30250 | Not Available | Positive | 6542393 - 6543328 | 34876.7 |
| fe-s oxidoreductase | RT97_30255 | Not Available | Positive | 6543354 - 6543656 | 10783.8 |
| kynurenine formamidase | RT97_30260 | Not Available | Positive | 6543746 - 6544399 | 23792.6 |
| kynureninase | RT97_30265 | Not Available | Positive | 6544411 - 6545688 | 45894.7 |
| hypothetical protein | RT97_30270 | Not Available | Positive | 6545702 - 6546199 | 18452.0 |
| tryptophan 2,3-dioxygenase | RT97_30275 | Not Available | Positive | 6546216 - 6547064 | 32382.7 |
| hypothetical protein | RT97_30280 | Not Available | Positive | 6547316 - 6548668 | 50150.6 |
| hypothetical protein | RT97_30285 | Not Available | Positive | 6548742 - 6549992 | 44325.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
