Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein thij | RT97_30190 | Not Available | Positive | 6532217 - 6532846 | 22131.4 |
| arac family transcriptional regulator | RT97_30195 | Not Available | Positive | 6532813 - 6533811 | 35727.8 |
| rna polymerase subunit sigma-24 | RT97_30200 | Not Available | Negative | 6533815 - 6535095 | 46300.9 |
| dna recombination protein recf | RT97_30205 | Not Available | Positive | 6535131 - 6536111 | 36588.6 |
| transcription initiation protein | RT97_30210 | Not Available | Negative | 6536118 - 6536534 | 15074.2 |
| dehydrogenase | RT97_30215 | Not Available | Negative | 6536562 - 6536990 | 15683.9 |
| glyoxalase | RT97_30220 | Not Available | Negative | 6537120 - 6537569 | 16065.2 |
| transglutaminase | RT97_30225 | Not Available | Negative | 6537566 - 6538420 | 31836.0 |
| membrane protein | RT97_30230 | Not Available | Negative | 6538503 - 6540056 | 55154.5 |
| 30s ribosomal protein s20 | RT97_30235 | Not Available | Positive | 6540174 - 6540488 | 11201.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
