Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gcn5 family acetyltransferase | RT97_30135 | Not Available | Positive | 6523063 - 6523587 | 18668.3 |
| hypothetical protein | RT97_30140 | Not Available | Positive | 6523584 - 6524030 | 16282.0 |
| inorganic phosphate transporter | RT97_30145 | Not Available | Negative | 6524041 - 6525051 | 35228.7 |
| phosphate transport regulator | RT97_30150 | Not Available | Negative | 6525066 - 6525710 | 24584.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | RT97_30160 | Not Available | Negative | 6526135 - 6526572 | 15604.0 |
| poly(a) polymerase | RT97_30165 | Not Available | Negative | 6526791 - 6528425 | 60587.1 |
| dnaa regulatory inactivator hda | RT97_30170 | Not Available | Negative | 6528444 - 6529130 | 25090.1 |
| phosphoribosylaminoimidazole synthetase | RT97_30175 | Not Available | Positive | 6529264 - 6530304 | 35981.7 |
| permease | RT97_30180 | Not Available | Positive | 6530409 - 6531443 | 37170.8 |
| hydrolase | RT97_30185 | Not Available | Positive | 6531577 - 6532143 | 20080.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
