Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m48 | RT97_30085 | Not Available | Positive | 6515156 - 6516421 | 46190.2 |
| pterin-4-alpha-carbinolamine dehydratase | RT97_30090 | Not Available | Positive | 6516453 - 6516803 | 12724.1 |
| gtpase rsga | RT97_30095 | Not Available | Positive | 6516816 - 6517775 | 34973.7 |
| histidinol-phosphate aminotransferase | RT97_30100 | Not Available | Negative | 6517769 - 6518857 | 39441.5 |
| cobalamin biosynthesis protein cbib | RT97_30105 | Not Available | Negative | 6518868 - 6519869 | 36308.9 |
| dna mismatch repair protein mutt | RT97_30110 | Not Available | Negative | 6519911 - 6520654 | 27039.2 |
| 50s ribosomal protein l19 | RT97_30115 | Not Available | Negative | 6520779 - 6521162 | 14093.2 |
| trna (guanine-n1)-methyltransferase | RT97_30120 | Not Available | Negative | 6521275 - 6522021 | 26984.3 |
| 16s rrna processing protein rimm | RT97_30125 | Not Available | Negative | 6522047 - 6522601 | 19978.7 |
| 30s ribosomal protein s16 | RT97_30130 | Not Available | Negative | 6522618 - 6522881 | 9674.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
