Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | RT97_29985 | Not Available | Negative | 6491701 - 6493020 | 48702.7 |
| branched-chain amino acid abc transporter substrate-binding protein | RT97_29990 | Not Available | Negative | 6493041 - 6494186 | 39793.0 |
| branched-chain amino acid abc transporter substrate-binding protein | RT97_29995 | Not Available | Negative | 6494221 - 6495390 | 41170.7 |
| short-chain dehydrogenase | RT97_30000 | Not Available | Negative | 6495552 - 6496277 | 25293.6 |
| cyclase | RT97_30005 | Not Available | Negative | 6496274 - 6497086 | 29561.0 |
| short-chain dehydrogenase | RT97_30010 | Not Available | Negative | 6497103 - 6498356 | 45213.4 |
| acetyl-coa acetyltransferase | RT97_30015 | Not Available | Negative | 6498353 - 6499525 | 41581.5 |
| amp-binding protein | RT97_30020 | Not Available | Negative | 6499522 - 6501156 | 58737.8 |
| phenylpropionate dioxygenase | RT97_30025 | Not Available | Negative | 6501164 - 6501652 | 18876.3 |
| oxidoreductase | RT97_30030 | Not Available | Negative | 6501652 - 6502965 | 49704.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
