Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_29935 | Not Available | Positive | 6482483 - 6482866 | 14217.9 |
| 4-hydroxybenzoyl-coa thioesterase | RT97_29940 | Not Available | Negative | 6482870 - 6483310 | 16094.7 |
| marr family transcriptional regulator | RT97_29945 | Not Available | Negative | 6483337 - 6483867 | 20051.2 |
| 3-hydroxyacyl-coa dehydrogenase | RT97_29950 | Not Available | Negative | 6483864 - 6484640 | 26367.4 |
| crotonobetainyl-coa:carnitine coa-transferase | RT97_29955 | Not Available | Negative | 6484736 - 6486322 | 56744.6 |
| metal-dependent hydrolase | RT97_29960 | Not Available | Negative | 6486312 - 6487043 | 26165.7 |
| hypothetical protein | RT97_29965 | Not Available | Negative | 6487126 - 6488913 | 63444.0 |
| abc transporter permease | RT97_29970 | Not Available | Negative | 6488910 - 6489965 | 36356.9 |
| branched-chain amino acid abc transporter substrate-binding protein | RT97_29975 | Not Available | Negative | 6490027 - 6491190 | 40802.4 |
| aromatic-ring-hydroxylating dioxygenase | RT97_29980 | Not Available | Negative | 6491231 - 6491704 | 17854.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
