Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_02945 | Not Available | Negative | 637075 - 637680 | 21580.9 |
| antibiotic biosynthesis monooxygenase | RT97_02950 | Not Available | Negative | 637773 - 638081 | 10903.2 |
| divalent metal cation transporter mnth | RT97_02955 | Not Available | Positive | 638197 - 639525 | 46937.4 |
| hypothetical protein | RT97_02960 | Not Available | Negative | 639541 - 639876 | 12008.1 |
| peptidase m4 | RT97_02965 | Not Available | Negative | 639873 - 640940 | 38132.9 |
| lysr family transcriptional regulator | RT97_02970 | Not Available | Negative | 641027 - 641947 | 33277.2 |
| tartrate dehydrogenase | RT97_02975 | Not Available | Positive | 642072 - 643163 | 39288.2 |
| mfs transporter | RT97_02980 | Not Available | Positive | 643232 - 644242 | 35189.9 |
| hypothetical protein | RT97_02985 | Not Available | Positive | 644340 - 644630 | 10628.9 |
| pirin | RT97_02990 | Not Available | Negative | 644776 - 645834 | 38133.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
