Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_29880 | Not Available | Positive | 6471981 - 6472190 | 7818.75 |
| hypothetical protein | RT97_29890 | Not Available | Positive | 6474582 - 6475160 | 21385.9 |
| hypothetical protein | RT97_29895 | Not Available | Positive | 6475157 - 6475723 | 21064.1 |
| hypothetical protein | RT97_29900 | Not Available | Positive | 6475724 - 6477013 | 47405.1 |
| abc transporter | RT97_29905 | Not Available | Positive | 6477010 - 6479139 | 78460.0 |
| hypothetical protein | RT97_29910 | Not Available | Negative | 6479754 - 6480176 | 15327.0 |
| restriction endonuclease | RT97_29915 | Not Available | Negative | 6480713 - 6481276 | 20722.0 |
| Trna-his | Not Available | Not Available | Positive | 6481329 - 6481402 | Not Available |
| short-chain dehydrogenase | RT97_29925 | Not Available | Negative | 6481432 - 6481638 | 7801.48 |
| Trna-arg | Not Available | Not Available | Positive | 6481676 - 6481752 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
