Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_29825 | Not Available | Negative | 6458474 - 6459961 | 51571.7 |
| hypothetical protein | RT97_29830 | Not Available | Negative | 6459958 - 6463827 | 137073.0 |
| dna helicase | RT97_29835 | Not Available | Negative | 6463950 - 6466361 | 89128.6 |
| guanosine 5'-monophosphate oxidoreductase | RT97_29840 | Not Available | Positive | 6466654 - 6467631 | 35592.0 |
| esterase | RT97_29845 | Not Available | Negative | 6467647 - 6468513 | 31527.6 |
| Trna-ala | Not Available | Not Available | Positive | 6468603 - 6468678 | Not Available |
| short-chain dehydrogenase | RT97_29855 | Not Available | Negative | 6468730 - 6469437 | 24293.2 |
| Trna-lys | Not Available | Not Available | Positive | 6469580 - 6469655 | Not Available |
| hypothetical protein | RT97_29870 | Not Available | Positive | 6471129 - 6471371 | 9045.93 |
| hypothetical protein | RT97_29875 | Not Available | Positive | 6471381 - 6471854 | 16035.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
