Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone | RT97_29775 | Not Available | Negative | 6447888 - 6448208 | 10696.7 |
| alkylhydroperoxidase | RT97_29780 | Not Available | Negative | 6448215 - 6448679 | 16553.7 |
| dna-binding protein | RT97_29785 | Not Available | Negative | 6448784 - 6450205 | 51791.0 |
| nad(p)h dehydrogenase | RT97_29790 | Not Available | Positive | 6450354 - 6450965 | 21918.4 |
| lysr family transcriptional regulator | RT97_29795 | Not Available | Negative | 6450962 - 6451864 | 32506.7 |
| glutamate carboxypeptidase | RT97_29800 | Not Available | Negative | 6451872 - 6453158 | 45753.2 |
| dna polymerase i | RT97_29805 | Not Available | Negative | 6453227 - 6456040 | 102808.0 |
| hypothetical protein | RT97_29810 | Not Available | Positive | 6456138 - 6456500 | 12836.0 |
| serine kinase | RT97_29815 | Not Available | Positive | 6456556 - 6457605 | 38256.9 |
| hypothetical protein | RT97_29820 | Not Available | Positive | 6457616 - 6458455 | 29755.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
