Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter permease | RT97_29725 | Not Available | Positive | 6437031 - 6437909 | 31122.9 |
| peptide abc transporter atp-binding protein | RT97_29730 | Not Available | Positive | 6437926 - 6438963 | 37724.9 |
| peptide abc transporter substrate-binding protein | RT97_29735 | Not Available | Positive | 6438960 - 6439955 | 36254.1 |
| d-aminoacylase | RT97_29740 | Not Available | Positive | 6439972 - 6441429 | 52053.2 |
| hypothetical protein | RT97_29745 | Not Available | Negative | 6442314 - 6442526 | 7561.92 |
| dihydroorotate dehydrogenase | RT97_29750 | Not Available | Negative | 6442661 - 6443569 | 32036.8 |
| carboxymethylenebutenolidase | RT97_29755 | Not Available | Negative | 6443679 - 6444578 | 31332.3 |
| aspartate racemase | RT97_29760 | Not Available | Negative | 6444744 - 6445481 | 25728.2 |
| abc transporter substrate-binding protein | RT97_29765 | Not Available | Negative | 6445594 - 6446484 | 32165.9 |
| amino acid dehydrogenase | RT97_29770 | Not Available | Positive | 6446674 - 6447885 | 42454.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
