Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_29675 | Not Available | Positive | 6426065 - 6427192 | 40533.5 |
| mfs transporter | RT97_29680 | Not Available | Negative | 6427266 - 6428465 | 40537.6 |
| hypothetical protein | RT97_29685 | Not Available | Negative | 6428764 - 6429171 | 14733.2 |
| hypothetical protein | RT97_29690 | Not Available | Negative | 6429274 - 6429567 | 10764.2 |
| arac family transcriptional regulator | RT97_29695 | Not Available | Positive | 6429758 - 6430723 | 34905.5 |
| xre family transcriptional regulator | RT97_29700 | Not Available | Negative | 6430746 - 6431453 | 25235.0 |
| fad-dependent oxidoreductase | RT97_29705 | Not Available | Positive | 6431658 - 6432818 | 40836.9 |
| microcystin lr degradation protein mlrc-like protein | RT97_29710 | Not Available | Positive | 6432857 - 6434308 | 51301.0 |
| peptide abc transporter permease | RT97_29715 | Not Available | Positive | 6434370 - 6435950 | 57087.6 |
| peptide abc transporter | RT97_29720 | Not Available | Positive | 6435975 - 6436910 | 33708.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
